← 1999-2000 Clausura Salvadoran Primera División →
| player | team | gp | g |
|---|---|---|---|
| Mauricio Dos Santos | Luis Ángel Firpo | — | 3 |
| Paul Cominges | C.D. Águila | — | 2 |
| Marlon Medrano | FAS | — | 2 |
| Juan Carlos Panameño | ADET | — | 2 |
| Washington Hernández | Luis Ángel Firpo | — | 1 |
| René Martínez | ADET | — | 1 |
| Misael Alfaro | Luis Ángel Firpo | — | 1 |